Package: fusedMGM 0.1.2
fusedMGM: Implementation of Fused MGM to Infer 2-Class Networks
Implementation of fused Markov graphical model (FMGM; Park and Won, 2022). The functions include building mixed graphical model (MGM) objects from data, inference of networks using FMGM, stable edge-specific penalty selection (StEPS) for the determination of penalization parameters, and the visualization. For details, please refer to Park and Won (2022) <doi:10.48550/arXiv.2208.14959>.
Authors:
fusedMGM_0.1.2.tar.gz
fusedMGM_0.1.2.zip(r-4.7)fusedMGM_0.1.2.zip(r-4.6)fusedMGM_0.1.2.zip(r-4.5)
fusedMGM_0.1.2.tgz(r-4.6-any)fusedMGM_0.1.2.tgz(r-4.5-any)
fusedMGM_0.1.2.tar.gz(r-4.7-any)fusedMGM_0.1.2.tar.gz(r-4.6-any)
fusedMGM_0.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
fusedMGM/json (API)
| # Install 'fusedMGM' in R: |
| install.packages('fusedMGM', repos = c('https://jaehyunparkbiostat.r-universe.dev', 'https://cloud.r-project.org')) |
- data_all - An example of 2-group mixed data
- data_mini - A toy example of 2-group mixed data
- ind_disc - An example of 2-group mixed data
- ind_disc_mini - A toy example of 2-group mixed data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:2c4940eb88. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 143 | ||
| source / vignettes | OK | 154 | ||
| linux-release-x86_64 | NOTE | 137 | ||
| macos-release-arm64 | NOTE | 122 | ||
| macos-oldrel-arm64 | NOTE | 132 | ||
| windows-devel | NOTE | 100 | ||
| windows-release | NOTE | 89 | ||
| windows-oldrel | NOTE | 99 | ||
| wasm-release | OK | 114 |
Exports:FMGM_mcFMGM_plotFMGM_StEPSmake_MGM_listMGM
Dependencies:BHbigalgebrabiganalyticsbiglmbigmemorybigmemory.sribitopscaToolsclicodetoolsdata.tableDBIfastDummiesforeachgluegplotsgtoolsiteratorsKernSmoothlifecyclemagrittrpillarpkgconfigRcpprlangstringistringrtibbleutf8uuidvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| An example of 2-group mixed data | data_all |
| A toy example of 2-group mixed data | data_mini |
| Main function of fused MGM | FMGM_mc |
| A plot function for a list of MGMs. The output is usually from FMGM main function. | FMGM_plot |
| StEPS: train subsamples and calculate edge instabilities | FMGM_StEPS |
| An example of 2-group mixed data | ind_disc |
| A toy example of 2-group mixed data | ind_disc_mini |
| Make MGM lists from input data | make_MGM_list |
| Defining S3 object "MGM" | MGM |
